Step Guide - Post section 20-Patches troubleshooting due to CTD

[lrogers287]

Hello, I have completed installing the files all the way through Step 20-Patches.
I have selected all the options - CCOR, CACO, lighting & weather for example.
I believe I have been consistent in the choices.  I probably missed something.

I tried to run the smoke test and it failed.  The way I read the guide I believe it should pass.

Launched via MO->SKSE.

I see a complaint about this.

I selected No to continue launching.  I got the Bethesda launch screen and then CTD.

I have run LOOT and here is a few complaints.   A sample is below.

I need some assistance in how to resolve these.  I am not clear if I should take the cue from LOOT on the corrective action or re-install or some other general troubleshooting guide , for example.