I had a similar problem. I was able to avoid it by setting DynDOLOD Output to the DynDOLOD program folder instead of the Mod Organizer mods folder. When DynDOLOD was finished, I cut and paste the DynDOLOD Ouput folder into the MO mods folder.
I had a problem similar to this. Loot, xEdit, Wrye Bash could all see my mods, but for some reason, FNIS and SkyrimSE itself could not. I ended up formatting my drive and reinstalling Windows and everything. That fixed my problem. It may have been some screwy registry or appdata issue that I doubt I would have been able to figure out in a timely fashion... so a complete reinstall of Windows was my solution. Probably not the best solution though...
I have stumbled upon another issue while running "The Great Equalizer" xEdit script. Edit: I'm going to use the MODL entries from "ICH - Patches Merged.esp" to replace the errored ones in the Conflict Resolution esp. [00:00] Checking for Errors in [4A] SRLE Extended LOTD - Conflict Resolution.esp [00:00] KA_dunRevakheimMaskClay "Clay Mask" [ARMO:33063315][00:00] ARMO \ Armature \ MODL - Model Filename -> [3D122758] < Error: Could not be resolved >[00:00] KA_ArmorDragonPriestMaskBronzeHelmet "Bronze Mask" [ARMO:3306FDFF][00:00] ARMO \ Armature \ MODL - Model Filename -> [3D122757] < Error: Could not be resolved >[00:00] ARMO \ Armature \ MODL - Model Filename -> [3D12274E] < Error: Could not be resolved >[00:00] KA_ArmorDragonPriestMaskCorondumHelmet "Copper Mask" [ARMO:3307036A][00:00] ARMO \ Armature \ MODL - Model Filename -> [3D122755] < Error: Could not be resolved >[00:00] ARMO \ Armature \ MODL - Model Filename -> [3D122751] < Error: Could not be resolved >[00:00] KA_ArmorDragonPriestMaskIronHelmet "Iron Mask" [ARMO:3307036C][00:00] ARMO \ Armature \ MODL - Model Filename -> [3D122753] < Error: Could not be resolved >[00:00] ARMO \ Armature \ MODL - Model Filename -> [3D122749] < Error: Could not be resolved >[00:00] ARMO \ Armature \ MODL - Model Filename -> [3D12274F] < Error: Could not be resolved >[00:00] KA_ArmorDragonPriestMaskSilverHelmet "Silver Mask" [ARMO:3307036D][00:00] ARMO \ Armature \ MODL - Model Filename -> [3D12274D] < Error: Could not be resolved >[00:00] KA_ArmorDragonPriestMaskMoonstoneHelmet "Moonstone Mask" [ARMO:3307036E][00:00] ARMO \ Armature \ MODL - Model Filename -> [3D122756] < Error: Could not be resolved >[00:00] ARMO \ Armature \ MODL - Model Filename -> [3D12274B] < Error: Could not be resolved >[00:00] ARMO \ Armature \ MODL - Model Filename -> [3D122752] < Error: Could not be resolved >[00:00] ARMO \ Armature \ MODL - Model Filename -> [3D122756] < Error: Could not be resolved >[00:00] KA_ArmorDragonPriestMaskSteelHelmet "Steel Mask" [ARMO:33070370][00:00] ARMO \ Armature \ MODL - Model Filename -> [3D122754] < Error: Could not be resolved >[00:00] ARMO \ Armature \ MODL - Model Filename -> [3D12274A] < Error: Could not be resolved >[00:00] ARMO \ Armature \ MODL - Model Filename -> [3D122750] < Error: Could not be resolved >[00:00] KA_ArmorDragonPriestMaskGlassHelmet "Glass Mask" [ARMO:330780C1][00:00] ARMO \ Armature \ MODL - Model Filename -> [3D12274C] < Error: Could not be resolved >[00:00] KA_dlcArmorDragonPriestMaskStalhrimHelmet "Stalhrim Mask" [ARMO:38119D51][00:00] ARMO \ Armature \ MODL - Model Filename -> [3D122747] < Error: Could not be resolved >[00:00] ARMO \ Armature \ MODL - Model Filename -> [3D122748] < Error: Could not be resolved >
I'm not sure if I screwed up somewhere or if I ran into a legit issue. I've gotten to the mod merging section of the guide, the Improved Closed Face Helmets section to be exact, and I ran into this problem... Checking for Errors in [0A] ICH - Legacy of the Dragonborn Patch.espArmorDragonPriestMaskQuicksilverHelmetDBM "Vahlok (replica)" [ARMO:0500FC78]ARMO \ Armature \ MODL - Model Filename -> [03166B5B] < Error: Could not be resolved >ArmorDragonPriestMaskWoodHelmetWWW2 "Necromancer's Glance" [ARMO:051226C5]ARMO \ Armature \ MODL - Model Filename -> [031226C4] < Error: Could not be resolved >ArmorDragonPriestMaskQuicksilverHelmet "Vahlok" [ARMO:05166B5A]ARMO \ Armature \ MODL - Model Filename -> [03166B5B] < Error: Could not be resolved >
I tried to send lifestorock a message on Nexus regarding this, but I get an error saying "The member lifestorock cannot receive any new messages". Hopefully someone will be able to let him know the link is busted.
A couple of things I've noticed while following the guide (so far): 1. Argonian Female Refined seems to have vanished from the Nexus. 2. Improved Closefaced Helmets WAF replacer esp link is broken.