I followed Gopher's installation video to get Enderal and Skyrim running on separate MO profiles. Soon after, I started following the SRLE guide with my Skyrim data files being installed through MO due to the dual profiles. However, now that I'm at the cleaning stage of SRLE, my plugins aren't being backed up and I can't tell if my updated ESMs are being saved.
So I'm not sure if I should just skip this step or attempt to resolve this issue. I think cleaning the ESMs are pretty important though, so I'd prefer to resolve this.