derp32

Yesterday, completed my first STEP Core installation. A lot to learn. I think it borked it up. I had a poor understanding of how to handle the Overwrite files when using MO to install mods. I made my bashed patches correctly I think, but other than that I wasn't checking Overwrite after each mod installation. Hence, when I happened to look at some point and find files in there, I wasn't sure what to do with them and I just DELETED them. Ya. Is there a way to recover from this? Is there a list of mods that populate files into Overwrite, and could I just reinstall those maybe? Is there something else I should do? The game looks fabulous and runs around 55-60 FPS, but the load times even when going through a door are perhaps 30-60 seconds or more and every once in a while the game freezes for 5-10 seconds. Last time it happened I was outside on the meadow running back to Whiterun from the Western Watchtower after killing my first dragon. My rig should be fine I think, vanilla Skryim ran amazing: Win7x64; i7-920 quad core; 12GB Ram DDR3; Radeon R9 280x 3GB PCI Express 3.0; motherboard is PCI Express 2.0 x16, but that should still be fine; OS and Skyrim Modding is all installed on 500GB SSD. Any thoughts or advice greatly appreciated.