SOLUTION: Did some research, apparently it's something to do with downloading the unofficial patches using OM. The solution was to delete the patches from OM and then manually re-download them from Nexus but don't use the Manager download link, download them to your computer manually and then from OM install mod and select each file. Once this is done WryeBash seems to be happy again. I imagine there will be a fix for this soon so others don't have to trip through it. More details here: https://forums.bethsoft.com/topic/1504437-relz-unofficial-skyrim-patch-thread-42/page-4