Skullriot

Ok, ended up modifying the files again after restarting the MO a couple times, I made copies of the files. So now the MO can manage both games. How do I rename the instances, cause my FO4 Instance is named Skyrim, and vice versa.

Ok so I went into the %appdata% file and edited mod organizer.ini, changing gameName=Fallout 4 gamePath=C:\\SteamLibrary\\steamapps\\common\\Fallout 4 to gameName=Skyrim gamePath=C:\\SteamLibrary\\steamapps\\common\\Skyrim but that only changed the Fallout 4 profile to read the game as skyrim. I changed one, changed it back, and then changed the other, and afterwards the only thing it did was change my fallout 4 profile to be skyrim, and leave the broken one as fallout 4. And the fallout 4 profile is now permanently labeled skyrim. I can't figure out how to delete the bad profile, or rename the good one.

I have done that as well, and selected Skyrim, but it still manages Fallout 4

I have been searching for this answer for a while, how do I set up MO to work with both skyrim and fo4? What i found says to install it in a different location. I have one instance installed in my fallout4\tools folder and skyrim\tools folder. When I start both instances they are linked to my FO4 install. I have attempted to change the location folders for each, but everything seems tied to my c:\users folder. I have my FO4 mods set up already, am I going to have to wipe everything and start over to fix this?