MO and BOSS mod order issue

[Quahogs]

I recently updated all of my unofficial patches and just noticed something.  As per Arthmoor and BOSS(when I run it) the order they list is as such:

 

Skyrim.esm

update.esm

Unoff Skyrim patch.esp

Dawnguard.esm

Unoff Dawnguard patch.esp

Hearthfires.esm

Unoff Hearthfires patch.esp

dragonborn.esm

Unoff dragonborn patch.esp

HRes pack 001.esp,  002.esp,  003.esp

unoffic HRes patch.esp

 

However the load order in MO in the right hand panel lists ALL my .esm in order (11 of them) and then it orders all of the unofficial patches after that

 

I thought BOSS was supposed to juggle the order in MO. Now when the games starts does the load order as per MO take precedence or does it load behind the scenes according to BOSS ?  

 

Should I be creating rules in BUM then ?  

[DoubleYou]

What version of Mod Organizer are you using? If it is 12.9, you will have to update in order for it to work.

[Quahogs]

That's correct 12.9. Fantastic. The auto update won't work so I have to figure a manual install. Not sure this is going to end well... I better back things up...

[Quahogs]

FYI:   The auto update didn't work and it blew up my older v. of MO.  It removed a bunch of .dll 's and wouldn't launch.  I guess I could have worked backwards but I made a copy to D:\ (but after I tried auto update) and experimented with copying 1.07 install over the older .129 directory.  Worked like a charm.   I was expecting much worse.